Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afxP27661 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afxP27661 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afxP27661 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afxP27661 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.42■□□□□ 0.7
H2afxP27661 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afxP27661 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afxP27661 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
H2afxP27661 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.42■□□□□ 0.7
H2afxP27661 Gm45444-201ENSMUST00000211394 898 ntBASIC19.42■□□□□ 0.7
H2afxP27661 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afxP27661 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
H2afxP27661 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.41■□□□□ 0.7
H2afxP27661 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afxP27661 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afxP27661 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
H2afxP27661 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afxP27661 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afxP27661 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
H2afxP27661 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.41■□□□□ 0.7
H2afxP27661 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.41■□□□□ 0.7
H2afxP27661 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
H2afxP27661 Gm9870-201ENSMUST00000063874 645 ntBASIC19.41■□□□□ 0.7
H2afxP27661 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afxP27661 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
H2afxP27661 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.4■□□□□ 0.7
H2afxP27661 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
H2afxP27661 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
H2afxP27661 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afxP27661 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
H2afxP27661 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.39■□□□□ 0.7
H2afxP27661 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
H2afxP27661 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afxP27661 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
H2afxP27661 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
H2afxP27661 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
H2afxP27661 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afxP27661 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.37■□□□□ 0.69
H2afxP27661 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.37■□□□□ 0.69
H2afxP27661 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.37■□□□□ 0.69
H2afxP27661 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
H2afxP27661 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.37■□□□□ 0.69
H2afxP27661 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
H2afxP27661 Haglr-201ENSMUST00000100000 2085 ntBASIC19.37■□□□□ 0.69
H2afxP27661 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afxP27661 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.37■□□□□ 0.69
H2afxP27661 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
H2afxP27661 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.36■□□□□ 0.69
H2afxP27661 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.36■□□□□ 0.69
H2afxP27661 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afxP27661 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.35■□□□□ 0.69
H2afxP27661 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afxP27661 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
H2afxP27661 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H2afxP27661 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afxP27661 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
H2afxP27661 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
H2afxP27661 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms