Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 BC021767-201ENSMUST00000126387 1716 ntBASIC17.16■□□□□ 0.34
Tnfrsf1bP25119 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Gm10602-201ENSMUST00000098239 609 ntBASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Tnfrsf1bP25119 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tnfrsf1bP25119 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1bP25119 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1bP25119 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Gm6211-202ENSMUST00000167849 925 ntBASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Gm29257-201ENSMUST00000186115 639 ntBASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1bP25119 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf1bP25119 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms