Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Haglr-201ENSMUST00000100000 2085 ntBASIC16.85■□□□□ 0.29
Cbx3P23198 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cbx3P23198 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cbx3P23198 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cbx3P23198 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.84■□□□□ 0.29
Cbx3P23198 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.84■□□□□ 0.29
Cbx3P23198 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cbx3P23198 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cbx3P23198 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cbx3P23198 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Cbx3P23198 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Cbx3P23198 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.83■□□□□ 0.28
Cbx3P23198 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cbx3P23198 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.83■□□□□ 0.28
Cbx3P23198 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cbx3P23198 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Gm5921-201ENSMUST00000075898 882 ntBASIC16.82■□□□□ 0.28
Cbx3P23198 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cbx3P23198 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cbx3P23198 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cbx3P23198 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cbx3P23198 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.81■□□□□ 0.28
Cbx3P23198 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cbx3P23198 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cbx3P23198 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.8■□□□□ 0.28
Cbx3P23198 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cbx3P23198 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cbx3P23198 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cbx3P23198 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cbx3P23198 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cbx3P23198 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.8■□□□□ 0.28
Cbx3P23198 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cbx3P23198 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cbx3P23198 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cbx3P23198 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cbx3P23198 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cbx3P23198 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms