Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ChrneP20782 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ChrneP20782 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.48■□□□□ 0.39
ChrneP20782 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.48■□□□□ 0.39
ChrneP20782 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ChrneP20782 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChrneP20782 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ChrneP20782 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.47■□□□□ 0.39
ChrneP20782 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
ChrneP20782 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ChrneP20782 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChrneP20782 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.46■□□□□ 0.39
ChrneP20782 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ChrneP20782 Mir5133-201ENSMUST00000174955 77 ntBASIC17.46■□□□□ 0.39
ChrneP20782 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.46■□□□□ 0.39
ChrneP20782 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.46■□□□□ 0.39
ChrneP20782 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ChrneP20782 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.46■□□□□ 0.39
ChrneP20782 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChrneP20782 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ChrneP20782 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ChrneP20782 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ChrneP20782 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ChrneP20782 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ChrneP20782 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.45■□□□□ 0.38
ChrneP20782 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.45■□□□□ 0.38
ChrneP20782 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChrneP20782 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChrneP20782 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.44■□□□□ 0.38
ChrneP20782 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ChrneP20782 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChrneP20782 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChrneP20782 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ChrneP20782 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChrneP20782 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChrneP20782 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.44■□□□□ 0.38
ChrneP20782 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChrneP20782 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ChrneP20782 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.43■□□□□ 0.38
ChrneP20782 Gm6420-201ENSMUST00000193885 723 ntBASIC17.43■□□□□ 0.38
ChrneP20782 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
ChrneP20782 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChrneP20782 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms