Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.87■□□□□ 0.61
VimP20152 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VimP20152 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VimP20152 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
VimP20152 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VimP20152 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VimP20152 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VimP20152 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.86■□□□□ 0.61
VimP20152 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VimP20152 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.86■□□□□ 0.61
VimP20152 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.86■□□□□ 0.61
VimP20152 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VimP20152 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VimP20152 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.85■□□□□ 0.61
VimP20152 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.85■□□□□ 0.61
VimP20152 Gm12366-201ENSMUST00000121722 873 ntBASIC18.85■□□□□ 0.61
VimP20152 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.85■□□□□ 0.61
VimP20152 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VimP20152 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.85■□□□□ 0.61
VimP20152 Gm5786-201ENSMUST00000085368 882 ntBASIC18.85■□□□□ 0.61
VimP20152 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VimP20152 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VimP20152 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.84■□□□□ 0.61
VimP20152 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VimP20152 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Gm45444-201ENSMUST00000211394 898 ntBASIC18.84■□□□□ 0.61
VimP20152 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VimP20152 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VimP20152 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VimP20152 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VimP20152 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VimP20152 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VimP20152 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VimP20152 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.83■□□□□ 0.6
VimP20152 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.83■□□□□ 0.6
VimP20152 Etf1-202ENSMUST00000180351 108 ntBASIC18.83■□□□□ 0.6
VimP20152 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
VimP20152 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VimP20152 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VimP20152 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VimP20152 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.83■□□□□ 0.6
VimP20152 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VimP20152 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.82■□□□□ 0.6
VimP20152 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.82■□□□□ 0.6
VimP20152 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.82■□□□□ 0.6
VimP20152 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.82■□□□□ 0.6
VimP20152 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VimP20152 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.82■□□□□ 0.6
VimP20152 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VimP20152 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VimP20152 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.81■□□□□ 0.6
VimP20152 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms