Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.46■□□□□ 0.87
Msh3P13705 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh3P13705 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Msh3P13705 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh3P13705 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh3P13705 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh3P13705 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Msh3P13705 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Msh3P13705 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh3P13705 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh3P13705 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.45■□□□□ 0.86
Msh3P13705 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh3P13705 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Msh3P13705 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.44■□□□□ 0.86
Msh3P13705 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Msh3P13705 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Msh3P13705 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Msh3P13705 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Msh3P13705 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh3P13705 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Msh3P13705 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Msh3P13705 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Msh3P13705 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh3P13705 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Msh3P13705 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Msh3P13705 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh3P13705 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Msh3P13705 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh3P13705 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.42■□□□□ 0.86
Msh3P13705 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.42■□□□□ 0.86
Msh3P13705 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Msh3P13705 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.42■□□□□ 0.86
Msh3P13705 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Gm42569-201ENSMUST00000200539 472 ntBASIC20.42■□□□□ 0.86
Msh3P13705 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.42■□□□□ 0.86
Msh3P13705 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Msh3P13705 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh3P13705 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Msh3P13705 Gm15039-201ENSMUST00000118914 875 ntBASIC20.41■□□□□ 0.86
Msh3P13705 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh3P13705 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.41■□□□□ 0.86
Msh3P13705 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh3P13705 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Msh3P13705 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Msh3P13705 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.4■□□□□ 0.86
Msh3P13705 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh3P13705 Gm27405-201ENSMUST00000184201 112 ntBASIC20.4■□□□□ 0.86
Msh3P13705 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.4■□□□□ 0.86
Msh3P13705 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.4■□□□□ 0.86
Msh3P13705 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Msh3P13705 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh3P13705 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh3P13705 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh3P13705 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Msh3P13705 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh3P13705 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Msh3P13705 Gm22325-201ENSMUST00000158904 308 ntBASIC20.39■□□□□ 0.85
Msh3P13705 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh3P13705 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh3P13705 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.38■□□□□ 0.85
Msh3P13705 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.38■□□□□ 0.85
Msh3P13705 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Msh3P13705 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Msh3P13705 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh3P13705 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Msh3P13705 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh3P13705 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh3P13705 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Msh3P13705 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh3P13705 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh3P13705 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.37■□□□□ 0.85
Msh3P13705 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Msh3P13705 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Msh3P13705 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.36■□□□□ 0.85
Msh3P13705 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms