Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col4a1P02463 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Col4a1P02463 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col4a1P02463 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col4a1P02463 Gm43799-201ENSMUST00000201845 579 ntBASIC23.06■■□□□ 1.28
Col4a1P02463 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Col4a1P02463 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.06■■□□□ 1.28
Col4a1P02463 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col4a1P02463 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.05■■□□□ 1.28
Col4a1P02463 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col4a1P02463 AC107452.1-201ENSMUST00000227963 481 ntBASIC23.05■■□□□ 1.28
Col4a1P02463 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col4a1P02463 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.04■■□□□ 1.28
Col4a1P02463 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.04■■□□□ 1.28
Col4a1P02463 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.04■■□□□ 1.28
Col4a1P02463 Flg-201ENSMUST00000050758 1488 ntBASIC23.04■■□□□ 1.28
Col4a1P02463 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col4a1P02463 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC23.03■■□□□ 1.28
Col4a1P02463 Gm37805-201ENSMUST00000192612 1094 ntBASIC23.03■■□□□ 1.28
Col4a1P02463 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.03■■□□□ 1.28
Col4a1P02463 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Col4a1P02463 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col4a1P02463 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col4a1P02463 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col4a1P02463 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col4a1P02463 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Col4a1P02463 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC23.02■■□□□ 1.28
Col4a1P02463 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col4a1P02463 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.02■■□□□ 1.28
Col4a1P02463 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Col4a1P02463 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col4a1P02463 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Col4a1P02463 Gm18025-201ENSMUST00000221733 862 ntBASIC23.01■■□□□ 1.27
Col4a1P02463 Gm5417-201ENSMUST00000079706 384 ntBASIC23.01■■□□□ 1.27
Col4a1P02463 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col4a1P02463 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col4a1P02463 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col4a1P02463 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
Col4a1P02463 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23■■□□□ 1.27
Col4a1P02463 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col4a1P02463 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col4a1P02463 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col4a1P02463 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.99■■□□□ 1.27
Col4a1P02463 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Col4a1P02463 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col4a1P02463 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Col4a1P02463 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Col4a1P02463 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Col4a1P02463 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Col4a1P02463 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.99■■□□□ 1.27
Col4a1P02463 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.98■■□□□ 1.27
Col4a1P02463 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Col4a1P02463 Gm43183-201ENSMUST00000200632 547 ntBASIC22.98■■□□□ 1.27
Col4a1P02463 Gm42545-201ENSMUST00000202755 922 ntBASIC22.98■■□□□ 1.27
Col4a1P02463 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.98■■□□□ 1.27
Col4a1P02463 Gm9987-201ENSMUST00000069768 567 ntBASIC22.98■■□□□ 1.27
Col4a1P02463 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Col4a1P02463 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Col4a1P02463 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col4a1P02463 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col4a1P02463 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.97■■□□□ 1.27
Col4a1P02463 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Col4a1P02463 Gm37292-201ENSMUST00000192062 758 ntBASIC22.97■■□□□ 1.27
Col4a1P02463 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col4a1P02463 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Col4a1P02463 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col4a1P02463 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms