Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.22■□□□□ 0.67
P01878 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P01878 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01878 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01878 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01878 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P01878 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
P01878 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.21■□□□□ 0.67
P01878 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.21■□□□□ 0.67
P01878 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.21■□□□□ 0.67
P01878 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01878 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.21■□□□□ 0.66
P01878 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P01878 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01878 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
P01878 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.2■□□□□ 0.66
P01878 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
P01878 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.2■□□□□ 0.66
P01878 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.2■□□□□ 0.66
P01878 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01878 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.2■□□□□ 0.66
P01878 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P01878 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01878 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01878 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.19■□□□□ 0.66
P01878 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
P01878 Mir5122-201ENSMUST00000175004 89 ntBASIC19.19■□□□□ 0.66
P01878 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
P01878 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
P01878 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
P01878 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01878 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01878 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01878 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
P01878 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
P01878 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.18■□□□□ 0.66
P01878 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01878 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01878 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01878 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01878 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
P01878 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Gm13836-201ENSMUST00000121159 501 ntBASIC19.17■□□□□ 0.66
P01878 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
P01878 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.17■□□□□ 0.66
P01878 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.17■□□□□ 0.66
P01878 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.17■□□□□ 0.66
P01878 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
P01878 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01878 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01878 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
P01878 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
P01878 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.15■□□□□ 0.66
P01878 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.15■□□□□ 0.66
P01878 Gm38285-201ENSMUST00000192928 922 ntBASIC19.15■□□□□ 0.66
P01878 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
P01878 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01878 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms