Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Abcd4O89016 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.7■□□□□ 0.26
Abcd4O89016 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Abcd4O89016 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Abcd4O89016 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.7■□□□□ 0.26
Abcd4O89016 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Abcd4O89016 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Abcd4O89016 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Abcd4O89016 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.69■□□□□ 0.26
Abcd4O89016 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Abcd4O89016 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Abcd4O89016 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abcd4O89016 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Abcd4O89016 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Abcd4O89016 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.69■□□□□ 0.26
Abcd4O89016 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abcd4O89016 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Abcd4O89016 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abcd4O89016 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.69■□□□□ 0.26
Abcd4O89016 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abcd4O89016 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.68■□□□□ 0.26
Abcd4O89016 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Abcd4O89016 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Abcd4O89016 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abcd4O89016 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.67■□□□□ 0.26
Abcd4O89016 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Gm10653-202ENSMUST00000139570 835 ntBASIC16.67■□□□□ 0.26
Abcd4O89016 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Gm20760-201ENSMUST00000179197 648 ntBASIC16.67■□□□□ 0.26
Abcd4O89016 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.67■□□□□ 0.26
Abcd4O89016 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Abcd4O89016 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abcd4O89016 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Abcd4O89016 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Abcd4O89016 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Abcd4O89016 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.66■□□□□ 0.26
Abcd4O89016 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Abcd4O89016 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Abcd4O89016 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Abcd4O89016 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abcd4O89016 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Abcd4O89016 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.65■□□□□ 0.26
Abcd4O89016 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms