Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syn1O88935 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Syn1O88935 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
Syn1O88935 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Gm10013-201ENSMUST00000106074 672 ntBASIC19.12■□□□□ 0.65
Syn1O88935 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Syn1O88935 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syn1O88935 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syn1O88935 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syn1O88935 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Syn1O88935 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syn1O88935 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Syn1O88935 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syn1O88935 Gm6345-202ENSMUST00000180900 204 ntBASIC19.11■□□□□ 0.65
Syn1O88935 Gm43183-201ENSMUST00000200632 547 ntBASIC19.11■□□□□ 0.65
Syn1O88935 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Syn1O88935 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Syn1O88935 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.1■□□□□ 0.65
Syn1O88935 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Gm11927-201ENSMUST00000118472 759 ntBASIC19.1■□□□□ 0.65
Syn1O88935 AA414768-201ENSMUST00000121924 1257 ntBASIC19.1■□□□□ 0.65
Syn1O88935 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.1■□□□□ 0.65
Syn1O88935 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Syn1O88935 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Syn1O88935 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.09■□□□□ 0.65
Syn1O88935 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.09■□□□□ 0.65
Syn1O88935 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Syn1O88935 Flg-201ENSMUST00000050758 1488 ntBASIC19.09■□□□□ 0.65
Syn1O88935 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Syn1O88935 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Syn1O88935 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Syn1O88935 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Syn1O88935 Gm14859-201ENSMUST00000117752 357 ntBASIC19.08■□□□□ 0.64
Syn1O88935 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.08■□□□□ 0.64
Syn1O88935 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Syn1O88935 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Syn1O88935 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Syn1O88935 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Syn1O88935 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Syn1O88935 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Syn1O88935 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Ank2-226ENSMUST00000189368 339 ntBASIC19.07■□□□□ 0.64
Syn1O88935 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Syn1O88935 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.07■□□□□ 0.64
Syn1O88935 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syn1O88935 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
Syn1O88935 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syn1O88935 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Syn1O88935 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms