Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Hdac3O88895 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac3O88895 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac3O88895 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac3O88895 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac3O88895 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac3O88895 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.52■□□□□ 0.24
Hdac3O88895 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac3O88895 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.52■□□□□ 0.24
Hdac3O88895 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac3O88895 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.52■□□□□ 0.24
Hdac3O88895 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac3O88895 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac3O88895 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac3O88895 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Hdac3O88895 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac3O88895 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac3O88895 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac3O88895 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac3O88895 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac3O88895 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac3O88895 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hdac3O88895 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac3O88895 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.51■□□□□ 0.23
Hdac3O88895 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac3O88895 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac3O88895 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac3O88895 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hdac3O88895 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Hdac3O88895 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.5■□□□□ 0.23
Hdac3O88895 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.5■□□□□ 0.23
Hdac3O88895 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.5■□□□□ 0.23
Hdac3O88895 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hdac3O88895 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hdac3O88895 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac3O88895 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.49■□□□□ 0.23
Hdac3O88895 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.49■□□□□ 0.23
Hdac3O88895 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hdac3O88895 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hdac3O88895 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Hdac3O88895 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac3O88895 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.48■□□□□ 0.23
Hdac3O88895 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.48■□□□□ 0.23
Hdac3O88895 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms