Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops4O88544 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops4O88544 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cops4O88544 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.09■□□□□ 0.33
Cops4O88544 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cops4O88544 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.09■□□□□ 0.33
Cops4O88544 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.09■□□□□ 0.33
Cops4O88544 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.09■□□□□ 0.33
Cops4O88544 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops4O88544 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cops4O88544 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cops4O88544 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cops4O88544 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops4O88544 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
Cops4O88544 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.08■□□□□ 0.32
Cops4O88544 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.08■□□□□ 0.32
Cops4O88544 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Cops4O88544 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Cops4O88544 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cops4O88544 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Cops4O88544 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops4O88544 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops4O88544 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.08■□□□□ 0.32
Cops4O88544 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops4O88544 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.07■□□□□ 0.32
Cops4O88544 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.07■□□□□ 0.32
Cops4O88544 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops4O88544 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cops4O88544 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Cops4O88544 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
Cops4O88544 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops4O88544 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Cops4O88544 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cops4O88544 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Cops4O88544 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.05■□□□□ 0.32
Cops4O88544 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Cops4O88544 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops4O88544 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cops4O88544 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Gm9847-201ENSMUST00000052528 599 ntBASIC17.04■□□□□ 0.32
Cops4O88544 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops4O88544 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cops4O88544 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 Serp2-204ENSMUST00000228055 705 ntBASIC17.03■□□□□ 0.32
Cops4O88544 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms