Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cacna1hO88427 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cacna1hO88427 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1hO88427 Gm37935-201ENSMUST00000192012 982 ntBASIC18.13■□□□□ 0.49
Cacna1hO88427 AW822252-206ENSMUST00000208904 237 ntBASIC18.13■□□□□ 0.49
Cacna1hO88427 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1hO88427 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1hO88427 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1hO88427 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cacna1hO88427 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.12■□□□□ 0.49
Cacna1hO88427 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Cacna1hO88427 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.12■□□□□ 0.49
Cacna1hO88427 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Cacna1hO88427 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Zfp783-201ENSMUST00000095946 670 ntBASIC18.12■□□□□ 0.49
Cacna1hO88427 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.12■□□□□ 0.49
Cacna1hO88427 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.12■□□□□ 0.49
Cacna1hO88427 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1hO88427 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.12■□□□□ 0.49
Cacna1hO88427 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1hO88427 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1hO88427 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.11■□□□□ 0.49
Cacna1hO88427 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cacna1hO88427 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Gm9013-201ENSMUST00000132939 882 ntBASIC18.11■□□□□ 0.49
Cacna1hO88427 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1hO88427 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.1■□□□□ 0.49
Cacna1hO88427 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.1■□□□□ 0.49
Cacna1hO88427 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1hO88427 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.1■□□□□ 0.49
Cacna1hO88427 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1hO88427 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.1■□□□□ 0.49
Cacna1hO88427 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1hO88427 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1hO88427 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cacna1hO88427 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cacna1hO88427 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cacna1hO88427 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
Cacna1hO88427 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1hO88427 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1hO88427 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1hO88427 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cacna1hO88427 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cacna1hO88427 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1hO88427 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1hO88427 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1hO88427 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cacna1hO88427 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cacna1hO88427 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1hO88427 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cacna1hO88427 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.07■□□□□ 0.48
Cacna1hO88427 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.07■□□□□ 0.48
Cacna1hO88427 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cacna1hO88427 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cacna1hO88427 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1hO88427 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Gm29518-201ENSMUST00000190858 372 ntBASIC18.06■□□□□ 0.48
Cacna1hO88427 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.06■□□□□ 0.48
Cacna1hO88427 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.06■□□□□ 0.48
Cacna1hO88427 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cacna1hO88427 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms