Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.88■□□□□ 0.29
Col5a1O88207 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.88■□□□□ 0.29
Col5a1O88207 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.88■□□□□ 0.29
Col5a1O88207 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col5a1O88207 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col5a1O88207 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.87■□□□□ 0.29
Col5a1O88207 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.87■□□□□ 0.29
Col5a1O88207 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a1O88207 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
Col5a1O88207 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Col5a1O88207 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col5a1O88207 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.86■□□□□ 0.29
Col5a1O88207 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.86■□□□□ 0.29
Col5a1O88207 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.86■□□□□ 0.29
Col5a1O88207 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col5a1O88207 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Col5a1O88207 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Col5a1O88207 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.85■□□□□ 0.29
Col5a1O88207 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.85■□□□□ 0.29
Col5a1O88207 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col5a1O88207 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.84■□□□□ 0.29
Col5a1O88207 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col5a1O88207 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.84■□□□□ 0.29
Col5a1O88207 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 Gm11927-201ENSMUST00000118472 759 ntBASIC16.84■□□□□ 0.29
Col5a1O88207 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.84■□□□□ 0.29
Col5a1O88207 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.84■□□□□ 0.29
Col5a1O88207 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col5a1O88207 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col5a1O88207 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col5a1O88207 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col5a1O88207 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Gm7889-201ENSMUST00000185591 958 ntBASIC16.83■□□□□ 0.28
Col5a1O88207 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col5a1O88207 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.83■□□□□ 0.28
Col5a1O88207 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.83■□□□□ 0.28
Col5a1O88207 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a1O88207 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col5a1O88207 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Col5a1O88207 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col5a1O88207 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col5a1O88207 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms