Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HcrtO55241 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HcrtO55241 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HcrtO55241 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.55■□□□□ 0.56
HcrtO55241 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
HcrtO55241 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HcrtO55241 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HcrtO55241 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HcrtO55241 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HcrtO55241 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
HcrtO55241 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.54■□□□□ 0.56
HcrtO55241 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HcrtO55241 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HcrtO55241 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HcrtO55241 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.54■□□□□ 0.56
HcrtO55241 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.54■□□□□ 0.56
HcrtO55241 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HcrtO55241 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HcrtO55241 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HcrtO55241 AV356131-201ENSMUST00000206201 750 ntBASIC18.53■□□□□ 0.56
HcrtO55241 Gm7514-201ENSMUST00000209475 934 ntBASIC18.53■□□□□ 0.56
HcrtO55241 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HcrtO55241 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HcrtO55241 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HcrtO55241 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HcrtO55241 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HcrtO55241 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.52■□□□□ 0.56
HcrtO55241 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
HcrtO55241 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HcrtO55241 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HcrtO55241 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.51■□□□□ 0.55
HcrtO55241 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.51■□□□□ 0.55
HcrtO55241 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HcrtO55241 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.5■□□□□ 0.55
HcrtO55241 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HcrtO55241 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HcrtO55241 Gm15039-201ENSMUST00000118914 875 ntBASIC18.5■□□□□ 0.55
HcrtO55241 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.5■□□□□ 0.55
HcrtO55241 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
HcrtO55241 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HcrtO55241 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.49■□□□□ 0.55
HcrtO55241 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HcrtO55241 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HcrtO55241 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.49■□□□□ 0.55
HcrtO55241 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.49■□□□□ 0.55
HcrtO55241 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HcrtO55241 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HcrtO55241 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.49■□□□□ 0.55
HcrtO55241 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HcrtO55241 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Gm8495-201ENSMUST00000188740 694 ntBASIC18.48■□□□□ 0.55
HcrtO55241 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HcrtO55241 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HcrtO55241 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HcrtO55241 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HcrtO55241 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HcrtO55241 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.47■□□□□ 0.55
HcrtO55241 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HcrtO55241 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HcrtO55241 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HcrtO55241 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HcrtO55241 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HcrtO55241 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms