Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.9■□□□□ 0.46
Cacna1bO55017 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.9■□□□□ 0.46
Cacna1bO55017 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1bO55017 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1bO55017 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1bO55017 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.89■□□□□ 0.46
Cacna1bO55017 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cacna1bO55017 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1bO55017 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1bO55017 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cacna1bO55017 Gm30025-201ENSMUST00000218555 728 ntBASIC17.89■□□□□ 0.45
Cacna1bO55017 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.89■□□□□ 0.45
Cacna1bO55017 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.89■□□□□ 0.45
Cacna1bO55017 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cacna1bO55017 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1bO55017 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cacna1bO55017 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1bO55017 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1bO55017 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.88■□□□□ 0.45
Cacna1bO55017 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cacna1bO55017 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Timm23-208ENSMUST00000226683 750 ntBASIC17.88■□□□□ 0.45
Cacna1bO55017 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cacna1bO55017 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1bO55017 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Cacna1bO55017 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.87■□□□□ 0.45
Cacna1bO55017 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.87■□□□□ 0.45
Cacna1bO55017 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cacna1bO55017 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cacna1bO55017 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Gm10517-202ENSMUST00000192970 758 ntBASIC17.87■□□□□ 0.45
Cacna1bO55017 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.87■□□□□ 0.45
Cacna1bO55017 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1bO55017 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1bO55017 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cacna1bO55017 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.86■□□□□ 0.45
Cacna1bO55017 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cacna1bO55017 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.86■□□□□ 0.45
Cacna1bO55017 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.86■□□□□ 0.45
Cacna1bO55017 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cacna1bO55017 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1bO55017 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1bO55017 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1bO55017 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cacna1bO55017 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1bO55017 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cacna1bO55017 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.85■□□□□ 0.45
Cacna1bO55017 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Cacna1bO55017 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1bO55017 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1bO55017 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cacna1bO55017 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cacna1bO55017 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1bO55017 Gm23634-201ENSMUST00000175071 91 ntBASIC17.84■□□□□ 0.45
Cacna1bO55017 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.84■□□□□ 0.45
Cacna1bO55017 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cacna1bO55017 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1bO55017 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms