Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Banf1O54962 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Banf1O54962 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Banf1O54962 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
Banf1O54962 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.84■□□□□ 0.61
Banf1O54962 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Banf1O54962 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.84■□□□□ 0.61
Banf1O54962 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Banf1O54962 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Banf1O54962 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Banf1O54962 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.83■□□□□ 0.61
Banf1O54962 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Banf1O54962 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Banf1O54962 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Banf1O54962 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.83■□□□□ 0.6
Banf1O54962 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.83■□□□□ 0.6
Banf1O54962 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Banf1O54962 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Banf1O54962 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Banf1O54962 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Banf1O54962 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.82■□□□□ 0.6
Banf1O54962 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.82■□□□□ 0.6
Banf1O54962 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Banf1O54962 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Banf1O54962 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Banf1O54962 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Banf1O54962 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Banf1O54962 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Banf1O54962 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Banf1O54962 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Banf1O54962 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.81■□□□□ 0.6
Banf1O54962 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.81■□□□□ 0.6
Banf1O54962 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.81■□□□□ 0.6
Banf1O54962 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Banf1O54962 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.8■□□□□ 0.6
Banf1O54962 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Banf1O54962 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Banf1O54962 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.8■□□□□ 0.6
Banf1O54962 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Banf1O54962 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.8■□□□□ 0.6
Banf1O54962 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Banf1O54962 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.79■□□□□ 0.6
Banf1O54962 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.79■□□□□ 0.6
Banf1O54962 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Banf1O54962 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Banf1O54962 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.79■□□□□ 0.6
Banf1O54962 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.79■□□□□ 0.6
Banf1O54962 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.79■□□□□ 0.6
Banf1O54962 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Banf1O54962 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.78■□□□□ 0.6
Banf1O54962 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.78■□□□□ 0.6
Banf1O54962 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Banf1O54962 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Banf1O54962 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms