Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Per2O54943 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Per2O54943 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Per2O54943 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.33■□□□□ 0.68
Per2O54943 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Per2O54943 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Per2O54943 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.32■□□□□ 0.68
Per2O54943 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per2O54943 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per2O54943 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.32■□□□□ 0.68
Per2O54943 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.32■□□□□ 0.68
Per2O54943 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Per2O54943 Gm10493-201ENSMUST00000097270 612 ntBASIC19.32■□□□□ 0.68
Per2O54943 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Per2O54943 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Per2O54943 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per2O54943 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per2O54943 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Per2O54943 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.31■□□□□ 0.68
Per2O54943 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Per2O54943 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.31■□□□□ 0.68
Per2O54943 Gm42778-201ENSMUST00000199644 553 ntBASIC19.31■□□□□ 0.68
Per2O54943 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.31■□□□□ 0.68
Per2O54943 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Per2O54943 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Per2O54943 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Per2O54943 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Per2O54943 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Per2O54943 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.29■□□□□ 0.68
Per2O54943 Gm13534-201ENSMUST00000121169 513 ntBASIC19.29■□□□□ 0.68
Per2O54943 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.29■□□□□ 0.68
Per2O54943 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.29■□□□□ 0.68
Per2O54943 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.29■□□□□ 0.68
Per2O54943 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.29■□□□□ 0.68
Per2O54943 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Per2O54943 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Per2O54943 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Per2O54943 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Per2O54943 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.29■□□□□ 0.68
Per2O54943 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Per2O54943 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Per2O54943 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Per2O54943 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Per2O54943 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.28■□□□□ 0.68
Per2O54943 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Per2O54943 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per2O54943 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per2O54943 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per2O54943 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Per2O54943 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per2O54943 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.27■□□□□ 0.68
Per2O54943 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Per2O54943 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Per2O54943 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Per2O54943 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Per2O54943 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Per2O54943 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Per2O54943 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms