Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.29■□□□□ 0.84
Sptlc1O35704 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptlc1O35704 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptlc1O35704 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptlc1O35704 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sptlc1O35704 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sptlc1O35704 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.28■□□□□ 0.84
Sptlc1O35704 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptlc1O35704 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sptlc1O35704 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sptlc1O35704 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sptlc1O35704 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sptlc1O35704 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Sptlc1O35704 Golph3-202ENSMUST00000226517 2359 ntBASIC20.27■□□□□ 0.84
Sptlc1O35704 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sptlc1O35704 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sptlc1O35704 Gm13158-201ENSMUST00000122007 736 ntBASIC20.27■□□□□ 0.84
Sptlc1O35704 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.27■□□□□ 0.84
Sptlc1O35704 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.27■□□□□ 0.84
Sptlc1O35704 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.27■□□□□ 0.84
Sptlc1O35704 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.27■□□□□ 0.84
Sptlc1O35704 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sptlc1O35704 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sptlc1O35704 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.26■□□□□ 0.83
Sptlc1O35704 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sptlc1O35704 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.26■□□□□ 0.83
Sptlc1O35704 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sptlc1O35704 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sptlc1O35704 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.26■□□□□ 0.83
Sptlc1O35704 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.26■□□□□ 0.83
Sptlc1O35704 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sptlc1O35704 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Sptlc1O35704 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sptlc1O35704 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Gm715-201ENSMUST00000117865 831 ntBASIC20.25■□□□□ 0.83
Sptlc1O35704 Gm15378-201ENSMUST00000121894 207 ntBASIC20.25■□□□□ 0.83
Sptlc1O35704 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.25■□□□□ 0.83
Sptlc1O35704 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.25■□□□□ 0.83
Sptlc1O35704 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.25■□□□□ 0.83
Sptlc1O35704 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptlc1O35704 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Sptlc1O35704 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Gm11927-201ENSMUST00000118472 759 ntBASIC20.24■□□□□ 0.83
Sptlc1O35704 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.24■□□□□ 0.83
Sptlc1O35704 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.24■□□□□ 0.83
Sptlc1O35704 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.24■□□□□ 0.83
Sptlc1O35704 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.24■□□□□ 0.83
Sptlc1O35704 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptlc1O35704 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sptlc1O35704 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sptlc1O35704 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Sptlc1O35704 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.23■□□□□ 0.83
Sptlc1O35704 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sptlc1O35704 Gm22325-201ENSMUST00000158904 308 ntBASIC20.23■□□□□ 0.83
Sptlc1O35704 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.23■□□□□ 0.83
Sptlc1O35704 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sptlc1O35704 Gm15823-201ENSMUST00000064305 670 ntBASIC20.23■□□□□ 0.83
Sptlc1O35704 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sptlc1O35704 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sptlc1O35704 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sptlc1O35704 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Flg-201ENSMUST00000050758 1488 ntBASIC20.22■□□□□ 0.83
Sptlc1O35704 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms