Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Phox2bO35690 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Phox2bO35690 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.55■□□□□ 0.56
Phox2bO35690 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Gm6345-202ENSMUST00000180900 204 ntBASIC18.55■□□□□ 0.56
Phox2bO35690 Gm33142-201ENSMUST00000193913 867 ntBASIC18.55■□□□□ 0.56
Phox2bO35690 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Phox2bO35690 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Phox2bO35690 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Phox2bO35690 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Phox2bO35690 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.54■□□□□ 0.56
Phox2bO35690 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Phox2bO35690 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.54■□□□□ 0.56
Phox2bO35690 Gm7889-201ENSMUST00000185591 958 ntBASIC18.54■□□□□ 0.56
Phox2bO35690 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Phox2bO35690 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Phox2bO35690 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.53■□□□□ 0.56
Phox2bO35690 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.53■□□□□ 0.56
Phox2bO35690 Gm11539-201ENSMUST00000119837 557 ntBASIC18.53■□□□□ 0.56
Phox2bO35690 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.53■□□□□ 0.56
Phox2bO35690 Gm13436-201ENSMUST00000120418 567 ntBASIC18.53■□□□□ 0.56
Phox2bO35690 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.53■□□□□ 0.56
Phox2bO35690 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Phox2bO35690 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.53■□□□□ 0.56
Phox2bO35690 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.52■□□□□ 0.56
Phox2bO35690 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Phox2bO35690 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Phox2bO35690 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.52■□□□□ 0.56
Phox2bO35690 Gm13158-201ENSMUST00000122007 736 ntBASIC18.52■□□□□ 0.56
Phox2bO35690 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.52■□□□□ 0.56
Phox2bO35690 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.52■□□□□ 0.56
Phox2bO35690 Gm44549-201ENSMUST00000208351 577 ntBASIC18.52■□□□□ 0.56
Phox2bO35690 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Phox2bO35690 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Phox2bO35690 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.52■□□□□ 0.55
Phox2bO35690 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.52■□□□□ 0.55
Phox2bO35690 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Phox2bO35690 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.51■□□□□ 0.55
Phox2bO35690 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Phox2bO35690 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.51■□□□□ 0.55
Phox2bO35690 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Phox2bO35690 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Phox2bO35690 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Phox2bO35690 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Phox2bO35690 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Phox2bO35690 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Phox2bO35690 Gm44771-201ENSMUST00000206975 626 ntBASIC18.5■□□□□ 0.55
Phox2bO35690 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.5■□□□□ 0.55
Phox2bO35690 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Phox2bO35690 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Phox2bO35690 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Phox2bO35690 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms