Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Stx1aO35526 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Stx1aO35526 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Stx1aO35526 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.82■□□□□ 0.92
Stx1aO35526 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.82■□□□□ 0.92
Stx1aO35526 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Stx1aO35526 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stx1aO35526 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stx1aO35526 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Stx1aO35526 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Stx1aO35526 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.8■□□□□ 0.92
Stx1aO35526 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Stx1aO35526 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Stx1aO35526 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.8■□□□□ 0.92
Stx1aO35526 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.8■□□□□ 0.92
Stx1aO35526 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stx1aO35526 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.8■□□□□ 0.92
Stx1aO35526 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Smad6-203ENSMUST00000179458 273 ntBASIC20.79■□□□□ 0.92
Stx1aO35526 Gm27801-201ENSMUST00000184174 223 ntBASIC20.79■□□□□ 0.92
Stx1aO35526 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.79■□□□□ 0.92
Stx1aO35526 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.79■□□□□ 0.92
Stx1aO35526 Gm9847-201ENSMUST00000052528 599 ntBASIC20.79■□□□□ 0.92
Stx1aO35526 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Stx1aO35526 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stx1aO35526 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.78■□□□□ 0.92
Stx1aO35526 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Stx1aO35526 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Stx1aO35526 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Stx1aO35526 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Stx1aO35526 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stx1aO35526 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stx1aO35526 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stx1aO35526 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Stx1aO35526 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stx1aO35526 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Stx1aO35526 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Stx1aO35526 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Stx1aO35526 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.91
Stx1aO35526 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Stx1aO35526 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Stx1aO35526 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Stx1aO35526 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.76■□□□□ 0.91
Stx1aO35526 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.76■□□□□ 0.91
Stx1aO35526 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Stx1aO35526 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms