Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Capn1O35350 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Capn1O35350 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Capn1O35350 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Capn1O35350 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.09■□□□□ 0.33
Capn1O35350 Gm5408-201ENSMUST00000197998 747 ntBASIC17.09■□□□□ 0.33
Capn1O35350 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Capn1O35350 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Capn1O35350 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Capn1O35350 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Capn1O35350 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Capn1O35350 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Capn1O35350 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Capn1O35350 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Capn1O35350 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Capn1O35350 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.08■□□□□ 0.32
Capn1O35350 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Capn1O35350 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Capn1O35350 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Capn1O35350 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Capn1O35350 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Capn1O35350 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.08■□□□□ 0.32
Capn1O35350 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Capn1O35350 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Capn1O35350 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Capn1O35350 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Capn1O35350 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.07■□□□□ 0.32
Capn1O35350 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Capn1O35350 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Capn1O35350 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.06■□□□□ 0.32
Capn1O35350 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Capn1O35350 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Capn1O35350 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn1O35350 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.05■□□□□ 0.32
Capn1O35350 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Capn1O35350 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.05■□□□□ 0.32
Capn1O35350 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Capn1O35350 Gm20760-201ENSMUST00000179197 648 ntBASIC17.05■□□□□ 0.32
Capn1O35350 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.05■□□□□ 0.32
Capn1O35350 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn1O35350 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.04■□□□□ 0.32
Capn1O35350 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.04■□□□□ 0.32
Capn1O35350 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn1O35350 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms