Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.47□□□□□ -0.09
Tnfsf11O35235 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.47□□□□□ -0.09
Tnfsf11O35235 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.46□□□□□ -0.09
Tnfsf11O35235 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf11O35235 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Tnfsf11O35235 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf11O35235 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.46□□□□□ -0.1
Tnfsf11O35235 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf11O35235 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf11O35235 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Gm5812-201ENSMUST00000061073 957 ntBASIC14.45□□□□□ -0.1
Tnfsf11O35235 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.45□□□□□ -0.1
Tnfsf11O35235 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf11O35235 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.44□□□□□ -0.1
Tnfsf11O35235 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf11O35235 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.43□□□□□ -0.1
Tnfsf11O35235 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf11O35235 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.42□□□□□ -0.1
Tnfsf11O35235 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Gm15546-201ENSMUST00000122095 826 ntBASIC14.42□□□□□ -0.1
Tnfsf11O35235 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Serp2-204ENSMUST00000228055 705 ntBASIC14.42□□□□□ -0.1
Tnfsf11O35235 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms