Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf2O35218 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf2O35218 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf2O35218 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf2O35218 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf2O35218 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf2O35218 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf2O35218 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf2O35218 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cpsf2O35218 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Cpsf2O35218 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf2O35218 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Cpsf2O35218 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Gm38205-201ENSMUST00000192243 258 ntBASIC19.75■□□□□ 0.75
Cpsf2O35218 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.75■□□□□ 0.75
Cpsf2O35218 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.75■□□□□ 0.75
Cpsf2O35218 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf2O35218 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.75■□□□□ 0.75
Cpsf2O35218 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.75■□□□□ 0.75
Cpsf2O35218 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf2O35218 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cpsf2O35218 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cpsf2O35218 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.74■□□□□ 0.75
Cpsf2O35218 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.74■□□□□ 0.75
Cpsf2O35218 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cpsf2O35218 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cpsf2O35218 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf2O35218 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.73■□□□□ 0.75
Cpsf2O35218 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf2O35218 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cpsf2O35218 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.73■□□□□ 0.75
Cpsf2O35218 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cpsf2O35218 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf2O35218 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.72■□□□□ 0.75
Cpsf2O35218 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.72■□□□□ 0.75
Cpsf2O35218 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf2O35218 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf2O35218 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.72■□□□□ 0.75
Cpsf2O35218 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cpsf2O35218 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cpsf2O35218 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.71■□□□□ 0.75
Cpsf2O35218 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Cpsf2O35218 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms