Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Polr2jO08740 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Polr2jO08740 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.78■□□□□ 0.44
Polr2jO08740 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Polr2jO08740 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.77■□□□□ 0.44
Polr2jO08740 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Polr2jO08740 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.77■□□□□ 0.44
Polr2jO08740 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Polr2jO08740 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.77■□□□□ 0.44
Polr2jO08740 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Polr2jO08740 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Mir7075-201ENSMUST00000184187 82 ntBASIC17.77■□□□□ 0.44
Polr2jO08740 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Polr2jO08740 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2jO08740 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Polr2jO08740 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Polr2jO08740 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2jO08740 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Polr2jO08740 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr2jO08740 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.76■□□□□ 0.43
Polr2jO08740 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Polr2jO08740 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Polr2jO08740 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2jO08740 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Polr2jO08740 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.75■□□□□ 0.43
Polr2jO08740 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Polr2jO08740 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Polr2jO08740 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2jO08740 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Polr2jO08740 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.74■□□□□ 0.43
Polr2jO08740 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Polr2jO08740 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Polr2jO08740 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2jO08740 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Polr2jO08740 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Polr2jO08740 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.73■□□□□ 0.43
Polr2jO08740 Gm21956-201ENSMUST00000179946 522 ntBASIC17.73■□□□□ 0.43
Polr2jO08740 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.73■□□□□ 0.43
Polr2jO08740 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2jO08740 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Polr2jO08740 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr2jO08740 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Polr2jO08740 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.72■□□□□ 0.43
Polr2jO08740 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr2jO08740 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Polr2jO08740 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Polr2jO08740 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms