Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Grk6-206ENSMUST00000224995 2971 ntBASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf11bO08712 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf11bO08712 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf11bO08712 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf11bO08712 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf11bO08712 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf11bO08712 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf11bO08712 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Gm9988-201ENSMUST00000069786 435 ntBASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf11bO08712 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf11bO08712 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Reep4-203ENSMUST00000226563 1444 ntBASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf11bO08712 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms