Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Flg-201ENSMUST00000050758 1488 ntBASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim34bJ3QNR8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Gm13158-201ENSMUST00000122007 736 ntBASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim34bJ3QNR8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Trim34bJ3QNR8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Trim34bJ3QNR8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim34bJ3QNR8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim34bJ3QNR8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Gm22325-201ENSMUST00000158904 308 ntBASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Trim34bJ3QNR8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Gm11927-201ENSMUST00000118472 759 ntBASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Gm6576-201ENSMUST00000169678 883 ntBASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Gm10698-201ENSMUST00000182663 604 ntBASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34bJ3QNR8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Gm15378-201ENSMUST00000121894 207 ntBASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34bJ3QNR8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim34bJ3QNR8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim34bJ3QNR8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Trim34bJ3QNR8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 Mir6982-201ENSMUST00000184354 68 ntBASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34bJ3QNR8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.63■■□□□ 1.21
Trim34bJ3QNR8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms