Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb9E9Q5G2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb9E9Q5G2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdhb9E9Q5G2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb9E9Q5G2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Gm20049-201ENSMUST00000219950 730 ntBASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb9E9Q5G2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Gm44549-201ENSMUST00000208351 577 ntBASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb9E9Q5G2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Golph3-205ENSMUST00000228671 2842 ntBASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Pcdhb9E9Q5G2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gm27011-201ENSMUST00000182352 972 ntBASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb9E9Q5G2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb9E9Q5G2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcdhb9E9Q5G2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb9E9Q5G2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb9E9Q5G2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms