Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.2■□□□□ 0.98
Syce3B5KM66 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.2■□□□□ 0.98
Syce3B5KM66 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.2■□□□□ 0.98
Syce3B5KM66 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.2■□□□□ 0.98
Syce3B5KM66 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Syce3B5KM66 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.2■□□□□ 0.98
Syce3B5KM66 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syce3B5KM66 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.19■□□□□ 0.98
Syce3B5KM66 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Syce3B5KM66 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.19■□□□□ 0.98
Syce3B5KM66 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syce3B5KM66 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syce3B5KM66 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Syce3B5KM66 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.19■□□□□ 0.98
Syce3B5KM66 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syce3B5KM66 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Syce3B5KM66 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Syce3B5KM66 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.18■□□□□ 0.98
Syce3B5KM66 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Syce3B5KM66 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Syce3B5KM66 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Syce3B5KM66 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.17■□□□□ 0.98
Syce3B5KM66 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Syce3B5KM66 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.17■□□□□ 0.98
Syce3B5KM66 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.17■□□□□ 0.98
Syce3B5KM66 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syce3B5KM66 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Syce3B5KM66 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.16■□□□□ 0.98
Syce3B5KM66 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.16■□□□□ 0.98
Syce3B5KM66 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.16■□□□□ 0.98
Syce3B5KM66 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
Syce3B5KM66 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syce3B5KM66 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
Syce3B5KM66 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.15■□□□□ 0.98
Syce3B5KM66 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.15■□□□□ 0.98
Syce3B5KM66 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syce3B5KM66 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.15■□□□□ 0.98
Syce3B5KM66 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syce3B5KM66 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syce3B5KM66 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Syce3B5KM66 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Syce3B5KM66 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syce3B5KM66 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Syce3B5KM66 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Syce3B5KM66 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Syce3B5KM66 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Syce3B5KM66 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Syce3B5KM66 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syce3B5KM66 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
Syce3B5KM66 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.14■□□□□ 0.97
Syce3B5KM66 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.14■□□□□ 0.97
Syce3B5KM66 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Syce3B5KM66 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syce3B5KM66 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.13■□□□□ 0.97
Syce3B5KM66 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Syce3B5KM66 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms