Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a6B1AVK5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Gm12382-201ENSMUST00000122005 922 ntBASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a6B1AVK5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a6B1AVK5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Timm23-208ENSMUST00000226683 750 ntBASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a6B1AVK5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col4a6B1AVK5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a6B1AVK5 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.27■□□□□ 0.68
Col4a6B1AVK5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a6B1AVK5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a6B1AVK5 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.27■□□□□ 0.68
Col4a6B1AVK5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.27■□□□□ 0.68
Col4a6B1AVK5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Gm10819-201ENSMUST00000099988 561 ntBASIC19.27■□□□□ 0.67
Col4a6B1AVK5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a6B1AVK5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a6B1AVK5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.24■□□□□ 0.67
Col4a6B1AVK5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms