Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.78■□□□□ 0.76
Sh2d4bA6X942 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2d4bA6X942 AA386476-201ENSMUST00000098781 1665 ntBASIC19.77■□□□□ 0.76
Sh2d4bA6X942 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sh2d4bA6X942 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Gm27275-201ENSMUST00000184318 272 ntBASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2d4bA6X942 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2d4bA6X942 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2d4bA6X942 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Gm5643-201ENSMUST00000117081 966 ntBASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Gm12896-201ENSMUST00000118430 226 ntBASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms