Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.8■□□□□ 0.6
Gm5640A3KG49 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Gm5812-201ENSMUST00000061073 957 ntBASIC18.8■□□□□ 0.6
Gm5640A3KG49 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.8■□□□□ 0.6
Gm5640A3KG49 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5640A3KG49 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.8■□□□□ 0.6
Gm5640A3KG49 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm5640A3KG49 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5640A3KG49 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.78■□□□□ 0.6
Gm5640A3KG49 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.78■□□□□ 0.6
Gm5640A3KG49 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5640A3KG49 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.77■□□□□ 0.6
Gm5640A3KG49 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5640A3KG49 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5640A3KG49 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5640A3KG49 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5640A3KG49 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm5640A3KG49 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm5640A3KG49 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5640A3KG49 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5640A3KG49 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5640A3KG49 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.74■□□□□ 0.59
Gm5640A3KG49 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Gm5640A3KG49 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Gm5640A3KG49 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.74■□□□□ 0.59
Gm5640A3KG49 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5640A3KG49 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms