Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Ttc39aA2ACP1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc39aA2ACP1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.08■□□□□ 0.49
Ttc39aA2ACP1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc39aA2ACP1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc39aA2ACP1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc39aA2ACP1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc39aA2ACP1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc39aA2ACP1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Gm11249-201ENSMUST00000117071 859 ntBASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc39aA2ACP1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Gm15378-201ENSMUST00000121894 207 ntBASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc39aA2ACP1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms