Protein–RNA interactions for Protein: A2A958

C87977, Expressed sequence C87977, mousemouse

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C87977A2A958 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C87977A2A958 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C87977A2A958 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C87977A2A958 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C87977A2A958 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C87977A2A958 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.89■□□□□ 0.93
C87977A2A958 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C87977A2A958 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C87977A2A958 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C87977A2A958 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.88■□□□□ 0.93
C87977A2A958 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C87977A2A958 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
C87977A2A958 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
C87977A2A958 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.87■□□□□ 0.93
C87977A2A958 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.87■□□□□ 0.93
C87977A2A958 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
C87977A2A958 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C87977A2A958 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.86■□□□□ 0.93
C87977A2A958 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Gm5643-201ENSMUST00000117081 966 ntBASIC20.86■□□□□ 0.93
C87977A2A958 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.86■□□□□ 0.93
C87977A2A958 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C87977A2A958 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
C87977A2A958 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
C87977A2A958 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
C87977A2A958 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
C87977A2A958 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C87977A2A958 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.85■□□□□ 0.93
C87977A2A958 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.85■□□□□ 0.93
C87977A2A958 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.85■□□□□ 0.93
C87977A2A958 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.85■□□□□ 0.93
C87977A2A958 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C87977A2A958 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C87977A2A958 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C87977A2A958 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Flg-201ENSMUST00000050758 1488 ntBASIC20.84■□□□□ 0.93
C87977A2A958 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.84■□□□□ 0.93
C87977A2A958 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
C87977A2A958 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
C87977A2A958 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.84■□□□□ 0.93
C87977A2A958 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C87977A2A958 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C87977A2A958 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C87977A2A958 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C87977A2A958 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C87977A2A958 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C87977A2A958 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.83■□□□□ 0.93
C87977A2A958 Gm10812-201ENSMUST00000099864 546 ntBASIC20.83■□□□□ 0.93
C87977A2A958 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.83■□□□□ 0.92
C87977A2A958 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C87977A2A958 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C87977A2A958 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C87977A2A958 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C87977A2A958 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C87977A2A958 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C87977A2A958 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
C87977A2A958 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C87977A2A958 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C87977A2A958 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
C87977A2A958 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C87977A2A958 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C87977A2A958 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C87977A2A958 Gm18666-201ENSMUST00000190039 958 ntBASIC20.81■□□□□ 0.92
C87977A2A958 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C87977A2A958 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
C87977A2A958 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms