Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.84■□□□□ 0.29
Smim17A0A504 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.84■□□□□ 0.29
Smim17A0A504 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim17A0A504 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim17A0A504 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim17A0A504 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim17A0A504 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smim17A0A504 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smim17A0A504 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Smim17A0A504 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smim17A0A504 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smim17A0A504 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Smim17A0A504 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smim17A0A504 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.83■□□□□ 0.28
Smim17A0A504 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim17A0A504 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.83■□□□□ 0.28
Smim17A0A504 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.83■□□□□ 0.28
Smim17A0A504 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim17A0A504 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim17A0A504 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim17A0A504 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim17A0A504 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim17A0A504 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smim17A0A504 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smim17A0A504 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.81■□□□□ 0.28
Smim17A0A504 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smim17A0A504 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smim17A0A504 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim17A0A504 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.8■□□□□ 0.28
Smim17A0A504 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.8■□□□□ 0.28
Smim17A0A504 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim17A0A504 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim17A0A504 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.78■□□□□ 0.28
Smim17A0A504 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim17A0A504 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smim17A0A504 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Smim17A0A504 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smim17A0A504 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Smim17A0A504 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim17A0A504 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms