Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Gm5874-201ENSMUST00000096101 508 ntBASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv17A0A140T8P8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.17□□□□□ -0.14
Trbv17A0A140T8P8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv17A0A140T8P8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Gm42642-201ENSMUST00000200683 355 ntBASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv17A0A140T8P8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.15
Trbv17A0A140T8P8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.15□□□□□ -0.15
Trbv17A0A140T8P8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Gm13234-201ENSMUST00000120010 747 ntBASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms