Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm5580A0A0N4SVP8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm5580A0A0N4SVP8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm38205-201ENSMUST00000192243 258 ntBASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm6139-201ENSMUST00000079261 882 ntBASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5580A0A0N4SVP8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm5580A0A0N4SVP8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm5580A0A0N4SVP8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5580A0A0N4SVP8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5580A0A0N4SVP8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5580A0A0N4SVP8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms