Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm5408-201ENSMUST00000197998 747 ntBASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2aA0A0J9YTW6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm27011-201ENSMUST00000182352 972 ntBASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2aA0A0J9YTW6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Scn2aA0A0J9YTW6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn2aA0A0J9YTW6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Scn2aA0A0J9YTW6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn2aA0A0J9YTW6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2aA0A0J9YTW6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms