Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Trav23A0A0G2JG17 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav23A0A0G2JG17 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Trav23A0A0G2JG17 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Haglr-201ENSMUST00000100000 2085 ntBASIC15.12■□□□□ 0.01
Trav23A0A0G2JG17 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav23A0A0G2JG17 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Gm13146-201ENSMUST00000118508 780 ntBASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav23A0A0G2JG17 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Trav23A0A0G2JG17 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms