Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Atg4a-psA0A0G2JFS9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.6■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Gm37179-201ENSMUST00000194862 823 ntBASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Gm6365-201ENSMUST00000054711 744 ntBASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atg4a-psA0A0G2JFS9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atg4a-psA0A0G2JFS9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Atg4a-psA0A0G2JFS9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atg4a-psA0A0G2JFS9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atg4a-psA0A0G2JFS9 Gm13148-201ENSMUST00000118892 745 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms