Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Reep4-203ENSMUST00000226563 1444 ntBASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms