Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Igkv5-43A0A0B4J1J2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.98■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.97■□□□□ 0.63
Igkv5-43A0A0B4J1J2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.97■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm13168-201ENSMUST00000121771 632 ntBASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm8520-201ENSMUST00000186517 868 ntBASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms