Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Mir5133-201ENSMUST00000174955 77 ntBASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm13148-201ENSMUST00000118892 745 ntBASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm26524-201ENSMUST00000192339 390 ntBASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms