Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Spcs1-204ENSMUST00000226782 949 ntBASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm7860-201ENSMUST00000121190 879 ntBASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Gm9847-201ENSMUST00000052528 599 ntBASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.52■□□□□ 0.4
Sirpb1aA0A0A6YYP6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sirpb1aA0A0A6YYP6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms