Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-3A0A075B695 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav9d-3A0A075B695 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 BC021767-201ENSMUST00000126387 1716 ntBASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-3A0A075B695 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Gm9988-201ENSMUST00000069786 435 ntBASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-3A0A075B695 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-3A0A075B695 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-3A0A075B695 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-3A0A075B695 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-3A0A075B695 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-3A0A075B695 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-3A0A075B695 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm38205-201ENSMUST00000192243 258 ntBASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms