Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6n-5A0A075B621 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6n-5A0A075B621 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6n-5A0A075B621 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6n-5A0A075B621 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-5A0A075B621 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-5A0A075B621 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-5A0A075B621 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Trav6n-5A0A075B621 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-5A0A075B621 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6n-5A0A075B621 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms