Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-1A0A075B601 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav9-1A0A075B601 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav9-1A0A075B601 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-1A0A075B601 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-1A0A075B601 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Gm38205-201ENSMUST00000192243 258 ntBASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-1A0A075B601 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms