Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm25189-201ENSMUST00000083911 164 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.72□□□□□ -1.33
Scrt1Q99M85 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Scrt1Q99M85 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scrt1Q99M85 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.71□□□□□ -1.33
Scrt1Q99M85 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 AC131743.4-201ENSMUST00000221638 1553 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm23706-201ENSMUST00000104369 82 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm14904-201ENSMUST00000117067 335 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm7599-201ENSMUST00000121453 796 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm22687-201ENSMUST00000158301 105 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm17138-201ENSMUST00000165702 459 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm3585-201ENSMUST00000173438 875 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm26179-201ENSMUST00000177723 132 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm6472-202ENSMUST00000187973 582 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm29273-201ENSMUST00000188880 262 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm5539-201ENSMUST00000192177 966 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm17530-201ENSMUST00000194336 472 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm43033-201ENSMUST00000199682 425 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm45299-201ENSMUST00000210199 420 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm7839-201ENSMUST00000210755 673 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm8512-201ENSMUST00000215367 471 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 AC241621.1-201ENSMUST00000224499 430 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 AC165281.1-201ENSMUST00000225713 1011 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm43571-201ENSMUST00000200067 3098 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm38014-201ENSMUST00000193349 2612 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Npr3-204ENSMUST00000228489 1969 ntBASIC6.71□□□□□ -1.34
Scrt1Q99M85 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC6.71□□□□□ -1.34
Scrt1Q99M85 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm12601-201ENSMUST00000118994 846 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm18848-201ENSMUST00000182069 792 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm27542-201ENSMUST00000184184 256 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm29577-201ENSMUST00000186427 693 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms