Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Traj54-201ENSMUST00000165071 54 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Mir8095-201ENSMUST00000185103 129 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm3121-201ENSMUST00000187086 406 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm28573-201ENSMUST00000187821 380 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm28145-201ENSMUST00000189742 380 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm28400-201ENSMUST00000191332 380 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm43471-201ENSMUST00000197550 467 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Gm13858-201ENSMUST00000118862 671 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Gm17047-201ENSMUST00000167709 430 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Gm29273-201ENSMUST00000188880 262 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Gm44979-201ENSMUST00000206218 287 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Gm32899-201ENSMUST00000219694 207 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Nup88Q8CEC0 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nup88Q8CEC0 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms