Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm38359-201ENSMUST00000191884 2225 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm15049-201ENSMUST00000120474 463 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm12642-201ENSMUST00000121098 876 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm14053-201ENSMUST00000121662 470 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm16580-201ENSMUST00000162696 1044 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm3611-201ENSMUST00000173687 877 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm25692-201ENSMUST00000175444 125 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm29355-201ENSMUST00000188178 697 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm28546-201ENSMUST00000188221 615 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm28953-201ENSMUST00000188336 697 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm20788-201ENSMUST00000190538 697 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm37395-201ENSMUST00000194721 697 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm7285-201ENSMUST00000198801 580 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm45432-201ENSMUST00000210391 416 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 AC131586.4-201ENSMUST00000228424 668 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trub1Q8C0D0 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.71□□□□□ -1.17
Trub1Q8C0D0 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Trub1Q8C0D0 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trub1Q8C0D0 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trub1Q8C0D0 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm15422-201ENSMUST00000117453 541 ntBASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm5250-201ENSMUST00000059065 321 ntBASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms